{ "_id": "6a214498cd65a98ecbd2b18d", "Package": "GEEaSPU", "Type": "Package", "Title": "Adaptive Association Tests for Multiple Phenotypes using\nGeneralized Estimating Equations (GEE)", "Version": "1.0.2", "Date": "2016-08-03", "Author": "Junghi Kim and Wei Pan", "Maintainer": "Junghi Kim ", "Description": "Provides adaptive association tests for SNP level, gene\nlevel and pathway level analyses.", "License": "GNU General Public License (>= 3)", "RoxygenNote": "5.0.1", "NeedsCompilation": "yes", "Packaged": { "Date": "2026-06-04 09:18:14 UTC", "User": "root" }, "Repository": "https://junghi.r-universe.dev", "Date/Publication": "2016-08-04 11:47:48 UTC", "RemoteUrl": "https://github.com/cran/GEEaSPU", "RemoteRef": "HEAD", "RemoteSha": "56aa48c405a07d22920058d9eafb6123549cb725", "MD5sum": "e3780377d4492c7f98cfd0422ac0e6cf", "_user": "junghi", "_type": "src", "_file": "GEEaSPU_1.0.2.tar.gz", "_fileid": "e8da393df742f3b5a1422946e7040075236ad01026ca404af24afec2f5cc77f3", "_filesize": 115523, "_sha256": "e8da393df742f3b5a1422946e7040075236ad01026ca404af24afec2f5cc77f3", "_created": "2026-06-04T09:18:14.000Z", "_published": "2026-06-04T09:25:44.395Z", "_distro": "noble", "_jobs": [ { "job": 79488070542, "time": 118, "config": "linux-devel-arm64", "r": "4.7.0", "check": "OK", "artifact": "7407723258" }, { "job": 79488070695, "time": 100, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7407715729" }, { "job": 79488070578, "time": 115, "config": "linux-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7407721754" }, { "job": 79488070632, "time": 113, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7407720522" }, { "job": 79488070656, "time": 147, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7407724566" }, { "job": 79488070531, "time": 394, "config": "macos-oldrel-x86_64", "r": "4.5.3", "check": "OK", "artifact": "7407804787" }, { "job": 79488070604, "time": 129, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7407718054" }, { "job": 79488070594, "time": 228, "config": "macos-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7407753788" }, { "job": 79487645604, "time": 151, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7407677880" }, { "job": 79488070571, "time": 100, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7407715164" }, { "job": 79488070511, "time": 100, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7407715715" }, { "job": 79488071024, "time": 129, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7407726027" }, { "job": 79488070573, "time": 96, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7407714218" } ], "_buildurl": "https://github.com/r-universe/junghi/actions/runs/26942622355", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/cran/GEEaSPU", "_commit": { "id": "56aa48c405a07d22920058d9eafb6123549cb725", "author": "Junghi Kim ", "committer": "cran-robot ", "message": "version 1.0.2\n", "time": 1470311268 }, "_maintainer": { "name": "Junghi Kim", "email": "junghikim0@gmail.com", "login": "junghi", "description": "", "uuid": 24611257 }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 2.10", "role": "Depends" }, { "package": "gee", "role": "Depends" }, { "package": "stats", "role": "Depends" }, { "package": "Rcpp", "role": "LinkingTo" }, { "package": "RcppArmadillo", "role": "LinkingTo" }, { "package": "Rcpp", "version": ">= 0.12.6", "role": "Imports" } ], "_owner": "cran", "_selfowned": true, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 0, "_contributors": [ { "user": "junghi", "count": 2, "uuid": 24611257 } ], "_userbio": { "uuid": 24611257, "type": "user", "name": "junghi" }, "_downloads": { "count": 172, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/GEEaSPU" }, "_mentions": 1, "_searchresults": 3, "_topics": [ "openblas", "cpp" ], "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/GEEaSPU.html", "manual.pdf" ], "_realowner": "junghi", "_cranurl": false, "_releases": [ { "version": "1.0.1", "date": "2016-07-26" }, { "version": "1.0.2", "date": "2016-08-04" } ], "_exports": [ "GEEaSPU", "GEEaSPUpath", "GEEaSPUset" ], "_help": [ { "page": "GEEaSPU-package", "title": "Adaptive Association Tests for Multiple Phenotypes using Generalized Estimating Equations (GEE)", "topics": [ "GEEaSPU-package" ] }, { "page": "GEEaSPU", "title": "An adaptive sum of powered score (SPU) test for single SNP and mutiple phenotypes", "topics": [ "GEEaSPU" ] }, { "page": "GEEaSPUpath", "title": "An adaptive sum of powered score (SPU) test for gene-set (pathway) and mutiple phenotypes", "topics": [ "GEEaSPUpath" ] }, { "page": "GEEaSPUset", "title": "An adaptive sum of powered score (SPU) test for SNP-set (gene) and mutiple phenotypes", "topics": [ "GEEaSPUset" ] } ], "_rundeps": [ "gee", "Rcpp", "RcppArmadillo" ], "_sysdeps": [ { "shlib": "liblapack", "package": "libopenblas0-pthread", "source": "openblas", "version": "0.3.26+ds-1ubuntu0.1", "name": "openblas", "homepage": "https://www.openblas.net/", "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)" }, { "shlib": "libblas", "package": "libopenblas0-pthread", "source": "openblas", "version": "0.3.26+ds-1ubuntu0.1", "name": "openblas", "homepage": "https://www.openblas.net/", "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)" }, { "shlib": "libstdc++", "package": "libstdc++6", "source": "gcc", "version": "14.2.0-4ubuntu2~24.04.1", "name": "c++", "homepage": "http://gcc.gnu.org/", "description": "GNU Standard C++ Library v3" } ], "_score": 1, "_indexed": true, "_nocasepkg": "geeaspu", "_universes": [ "junghi" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.0.2", "date": "2026-06-04T09:20:27.000Z", "distro": "noble", "arch": "aarch64", "commit": "56aa48c405a07d22920058d9eafb6123549cb725", "fileid": "750fca419b720eef9e35f07940c4f4996cdd935ebfe6239799cb816ac26ae666", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/junghi/actions/runs/26942622355" }, { "r": "4.7.0", "os": "linux", "version": "1.0.2", "date": "2026-06-04T09:20:06.000Z", "distro": "noble", "arch": "x86_64", "commit": "56aa48c405a07d22920058d9eafb6123549cb725", "fileid": "824a36049df5bd1dcac438c7285d1399aa9d3acaa74e09b5c45ac30b24c6dafa", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/junghi/actions/runs/26942622355" }, { "r": "4.6.0", "os": "linux", "version": "1.0.2", "date": "2026-06-04T09:20:22.000Z", "distro": "noble", "arch": "aarch64", "commit": "56aa48c405a07d22920058d9eafb6123549cb725", "fileid": "6c4b5cb3e1eac241f49bc57f90903d99f15a6bf4d5d7a15650f77445aacb7251", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/junghi/actions/runs/26942622355" }, { "r": "4.6.0", "os": "linux", "version": "1.0.2", "date": "2026-06-04T09:20:18.000Z", "distro": "noble", "arch": "x86_64", "commit": "56aa48c405a07d22920058d9eafb6123549cb725", "fileid": "31edf195813b8a1d5fa6ffeb84e1987c755a1fa0bb1059c215cdf8f2669bb044", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/junghi/actions/runs/26942622355" }, { "r": "4.5.3", "os": "mac", "version": "1.0.2", "date": "2026-06-04T09:20:33.000Z", "arch": "aarch64", "commit": "56aa48c405a07d22920058d9eafb6123549cb725", "fileid": "7e612122b331ca8d8bc2e2fdeb4bbad093349d71a0b8a2e3b78cf665a596676d", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/junghi/actions/runs/26942622355" }, { "r": "4.5.3", "os": "mac", "version": "1.0.2", "date": "2026-06-04T09:23:41.000Z", "arch": "x86_64", "commit": "56aa48c405a07d22920058d9eafb6123549cb725", "fileid": "6b9745557cc5a1353589ffebafc97665f5026520e11a6d20ad89d06c35698f4b", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/junghi/actions/runs/26942622355" }, { "r": "4.6.0", "os": "mac", "version": "1.0.2", "date": "2026-06-04T09:20:18.000Z", "arch": "aarch64", "commit": "56aa48c405a07d22920058d9eafb6123549cb725", "fileid": "1383ed1988db5ed82aa43da818c07153adb6d94bf64e6e4cc97b9df36501c1c9", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/junghi/actions/runs/26942622355" }, { "r": "4.6.0", "os": "mac", "version": "1.0.2", "date": "2026-06-04T09:21:36.000Z", "arch": "x86_64", "commit": "56aa48c405a07d22920058d9eafb6123549cb725", "fileid": "551d561da59302075902117eb086e1fb9dc4cd9a2176cb6ae047e44c73fdecc0", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/junghi/actions/runs/26942622355" }, { "r": "4.6.0", "os": "wasm", "version": "1.0.2", "date": "2026-06-04T09:20:17.000Z", "arch": "emscripten", "commit": "56aa48c405a07d22920058d9eafb6123549cb725", "fileid": "c2cb57beef54c15e485c1748ecaa495ec3cd13cf90039709891b124de1173f62", "status": "success", "buildurl": "https://github.com/r-universe/junghi/actions/runs/26942622355" }, { "r": "4.7.0", "os": "win", "version": "1.0.2", "date": "2026-06-04T09:19:37.000Z", "arch": "x86_64", "commit": "56aa48c405a07d22920058d9eafb6123549cb725", "fileid": "a5abca665aec71586830b26804fe6ee0a7f2a02ef7a69cd3068028ea9790b950", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/junghi/actions/runs/26942622355" }, { "r": "4.5.3", "os": "win", "version": "1.0.2", "date": "2026-06-04T09:19:46.000Z", "arch": "x86_64", "commit": "56aa48c405a07d22920058d9eafb6123549cb725", "fileid": "ec8314c4af3f5fb3670c1863166ac15b8540298ebf3fb5951f27f655f5546dbd", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/junghi/actions/runs/26942622355" }, { "r": "4.6.0", "os": "win", "version": "1.0.2", "date": "2026-06-04T09:19:35.000Z", "arch": "x86_64", "commit": "56aa48c405a07d22920058d9eafb6123549cb725", "fileid": "9d80a924cffa38759988060160ed9528e964f05ffb61aa286ea8ce8ffd3721f9", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/junghi/actions/runs/26942622355" } ] }